Ex Parte LI et alDownload PDFPatent Trial and Appeal BoardFeb 17, 201712366321 (P.T.A.B. Feb. 17, 2017) Copy Citation United States Patent and Trademark Office UNITED STATES DEPARTMENT OF COMMERCE United States Patent and Trademark Office Address: COMMISSIONER FOR PATENTS P.O.Box 1450 Alexandria, Virginia 22313-1450 www.uspto.gov APPLICATION NO. FILING DATE FIRST NAMED INVENTOR ATTORNEY DOCKET NO. CONFIRMATION NO. 12/366,321 02/05/2009 Yuhua Li 5507-16 7615 86012 7590 VLP Law Group LLP 555 Bryant Street Suite 820 Palo Alto, CA 94301 EXAMINER STANFIELD, CHERIE MICHELLE ART UNIT PAPER NUMBER 1647 NOTIFICATION DATE DELIVERY MODE 02/22/2017 ELECTRONIC Please find below and/or attached an Office communication concerning this application or proceeding. The time period for reply, if any, is set in the attached communication. Notice of the Office communication was sent electronically on above-indicated "Notification Date" to the following e-mail address(es): patents @ vlplawgroup. com PTOL-90A (Rev. 04/07) UNITED STATES PATENT AND TRADEMARK OFFICE BEFORE THE PATENT TRIAL AND APPEAL BOARD Ex parte YUHUA LI, ANDREW GUARINO, and BENJAMIN CHIEN1 Appeal 2016-001598 Application 12/366,321 Technology Center 1600 Before DONALD E. ADAMS, TAWEN CHANG, and JOHN E. SCHNEIDER, Administrative Patent Judges. CHANG, Administrative Patent Judge. DECISION ON APPEAL This is an appeal under 35 U.S.C. § 134(a) involving claims to a composition for sustained release of a protein or peptide, which have been rejected as obvious and/or indefinite. We have jurisdiction under 35 U.S.C. § 6(b). We AFFIRM. 1 Appellants identify the Real Party in Interest as Foresee Pharmaceuticals Co., Ltd. (Br. 2.) 1 Appeal 2016-001598 Application 12/366,321 STATEMENT OF THE CASE “Hydrophobic, non-polymeric materials, particularly . . . highly viscous, nonpolymeric liquid materials[,] have been described as biodegradable systems for controlled release delivery of bioactive compounds.” (Spec. 12.) The Specification states that combining such materials with a plasticizing solvent results in a lower viscosity mixture that can be formulated with a bioactive compound and administered to a subject to form a highly viscous depot in the subject’s body. (Id.) According to the Specification, however, many bioactive agents, particularly hydrophilic peptides and proteins, may not be compatible with the hydrophobic non- polymeric carrier, resulting in an unstable formulation that, for instance, undergoes phase separation. (Id. at 14.) Further according to the Specification, an undesirable “high initial burst release of the protein or peptide [may be] observed during the depot formation process,” and nucleophilic proteins or peptides may interact with the carrier material to expedite the degradation of the carrier and/or chemically alter the proteins or peptides. (Id. at||4, 10.) The Specification states that the present invention relates to a liquid composition “suitable for in-situ formation of a depot system to deliver a protein or peptide in a controlled, sustained manner,” comprising a hydrophobic non-polymeric carrier, a water miscible biocompatible organic solvent, and “a protein or peptide covalently conjugated with one or more formulation performance-enhancing compound(s)” that “stabilize[] the protein or peptide, increase[] the compatibility with non-polymeric carrier material, and improve[] the release profile of the protein or peptide.” (Id. at 117-8.) 2 Appeal 2016-001598 Application 12/366,321 Claims 1—10, 16—21, and 23—27 are on appeal. Claim 1 is illustrative and reproduced below: 1. A composition for sustained release of a protein or peptide, comprising: (a) a hydrophobic non-polymeric carrier material; (b) a water miscible pharmaceutically acceptable solvent; and (c) a protein or peptide covalently conjugated with one or more amphiphilic molecule(s), wherein (c) maintains the stability of the composition by preventing phase separation. (Br. 9 (Claims App’x).) During prosecution, Applicants elected the following species for prosecution on the merits: sucrose acetate isobutyrate (SAIB) as the hydrophobic non-polymeric carrier material; methoxy polyethylene glycol 350 (MPEG350) as the water miscible pharmaceutically acceptable solvent; octreotide as the protein or peptide, and monopalmityl polyethylene glycol) or polyethylene glycol hexadecyl ether as the “formulation performance enhancing compound” such as an amphiphilic molecule. (Response2 1—2.) The Examiner rejects claims 1—10, 16—21, and 23—27 under 35 U.S.C. § 103(a) as being unpatentable over Tipton3 and Li.4 (Ans. 6.) The Examiner rejects claims 23 and 24 under 35 U.S.C. § 112, second paragraph, as being indefinite. (Id. at 3.)5 2 Response to Requirement for Election of Species/Restriction (May 20, 2010). 3 Tipton et al., US Patent No. 5,747,058, issued May 5, 1998. 4 Li et al., US 2008/0020016 Al, published Jan. 24, 2008. 5 In the Answer, the Examiner also reiterates objections to claims 10 and 23— 27 for certain informalities. (Ans. 2—3). These objections constitute petitionable (rather than appealable) matter. Thus, we do not address them. See in re Hengehold, 440 F.2d 1395, 1403-04 (CCPA 1971). 3 Appeal 2016-001598 Application 12/366,321 I. Issue The Examiner has rejected claims 1—10, 16—21, and 23—27 under 35 U.S.C. § 103(A) as obvious over Tipton and Li. The Examiner finds that Tipton teaches “a composition for sustained release of proteins comprising sucrose acetate isobutyrate (SAIB), N-methylpyrrolidone [(NMP)], biodegradable polymers, and PEG conjugated peptides and small molecule compositions, including hormones, growth factors, and cytokines.” (Ans. 6.) The Examiner finds that Tipton teaches “optional embodiments where the protein or peptide of interest may be covalently conjugated.” (Id.) The Examiner finds that Tipton does not specifically disclose the elected species of octreotide or GLP-1 as the bioactive substance. (Id.) However, the Examiner finds that Tipton teaches “generic generas of hormones, growth factors, and cytokines.” (Id.) The Examiner further finds that Li teaches the limitations of claim 1 and also teaches octreotide and GLP-1. (Id. at 7, 10.) In particular, the Examiner finds that Li teaches “various compositions including PAL-PEG-BA-OCT in a solution of NMP”6 as well as “selective covalent conjugation of peptides to .. . amphiphilic moieties,” including “amphiphilic molecule covalently conjugated to octreotide.” (Id. at 7.) The Examiner finds that “[t]he teaching of SAIB by Tipton meets the limitation of instant claim 1(a),” “[t]he NMP taught by both Li and Tipton meet the limitation of instant claims 1(b),” and “[t]he amphiphilic molecule 6 PAL-PEG-BA-OCT refers to the conjugated peptide resulting from the conjugation of octreotide with monopalmityl polyethylene glycol). (Li | 77.) 4 Appeal 2016-001598 Application 12/366,321 covalently conjugated to octreotide” taught by Li meets the limitation of claim 1(c). (Id. at 7—8.) The Examiner further finds that, “[ajbsent evidence to the contrary, the compositions of Li meet the limitation of the wherein clause of claim 1,” because “[t]he physical properties of the composition where the amphiphilic molecules maintain the stability of the composition by preventing phase separation are inherent properties of the composition itself.” (Id.) Finally, the Examiner finds that “[t]he sustained release compositional formulations of both Tipton and Li substantially overlap in terms of their components and also in their intended use/purpose,” and concludes that “[o]ne of skill in the art would have recognized that the results of the combination would have yielded nothing more than predictable results . . . .” (Id. at 9.) The Examiner also finds that it would have been obvious to use the octreotide taught by Li as the bioactive substance because “Tipton teaches that any pharmaceutical bioactive protein would be useful in [its] formulation” and because it would be prima facie obvious to substitute one known element (i.e., Tipton’s genera of hormones, growth factors, and cytokines) for another (Li’s octreotide or GLP-1) to obtain predictable results. (Id. at 9—10.) Appellants contend that there is no reason to combine Tipton and Li. (Br. 4.) Appellants also argue that, [e]ven if both the Tipton and Li references could be combined, there would not have been a reasonable expectation that combining these elements would yield a composition having the desired property of 5 Appeal 2016-001598 Application 12/366,321 preventing phase separation and maintaining the stability of the formulation. (Id. at 5.) Appellants further argue that the claimed subject matter exhibits the unexpected results of increased stability and prevention of phase separation. (Id. at 5—6.) Appellants do not separately argue the claims. (Id. at 7.) We therefore limit our analysis to claim 1. The issue with respect to this rejection is whether the evidence of record supports the Examiner’s conclusion that the cited references would have rendered the composition of claim 1 obvious and, if so, whether Appellants have provided evidence of unexpected results that outweighs the evidence supporting a conclusion of obviousness. Findings of Fact 1. Tipton teaches “[a] composition for the controlled release of substances . . . that includes: (i) a non-polymeric, non-water soluble liquid carrier material (HVLCM) of viscosity of at least 5,000 cP at 37- C. that does not crystallize neat under ambient or physiological conditions; and (ii) a substance to be delivered.” (Tipton Abstract; see also id. at claim 1.) 2. Tipton discloses SAIB as a preferred embodiment of a non- polymeric, non-water soluble liquid carrier material. (See, e.g., id. at 5:64— 6:19; see also id. at claim 2.) 3. Tipton teaches that, [i]n one embodiment, the HVLCM is mixed with a viscosity lowering water soluble or miscible solvent such as . . . N-methylpyrrolidone [(NMP)] . . . , to form a lower viscosity liquid carrier material (LVLCM), which is mixed with the substance to be delivered, prior to administration. . . . On administration, the composition is placed into 6 Appeal 2016-001598 Application 12/366,321 the body or on a surface, and the solvent dissipates or diffuses away from the LVLCM, forming in-situ a highly viscous implant or composition that releases the substance over time. (Id. at 2:47—63; see also id. at 5:50—57, 10:12—15, 10:23—25, 10:52—57, claims 5, 6, 16.) 4. Tipton teaches that “[a] variety of additives can optionally be added to the HVLCM or LVLCM to modify the properties of the material as desired.” (Id. at 8:53—55; see also id. at claim 8.) 5. Tipton teaches that “[o]ne category of additives are biodegradable polymers and oligomers,” which “can be used to alter the release profile of the substance to be delivered, to add integrity to the composition, or to otherwise modify the properties of the composition.” (Id. at 9:8—12; see also id. at claims 9, 56.) 6. Tipton teaches that “[i]n humans the composition can be used for the delivery of a wide range of biologically active substances,” such as proteins, peptides, and hormones. (Id. at 3:11—13, 6:50-65 (biological active substance includes peptide, protein, and hormone), claims 11, 37, 40.) 7. Tipton suggests that use of its non-polymeric, non-water soluble high-viscosity liquid carrier material provides “more simple systems with low toxicity for the controlled delivery of substances.” (Id. at 2:20—29.) 8. Li’s invention “relates to the field of controlled release delivery of therapeutic peptides and to compositions and methods useful for controlled release delivery of therapeutic peptides covalently modified with one or more lipophilic or amphiphilic molecules.” (Li 14; see also id. at 11 12, 20, 60.) 7 Appeal 2016-001598 Application 12/366,321 9. More particularly, Li teaches methods of forming a solid, biodegradable implant in-situ in a body by administering a liquid pharmaceutical composition comprising an effective amount of a biocompatible, water-insoluble, biodegradable polymer and an effective amount of a therapeutic peptide covalently modified with one or more lipophilic or amphiphilic moieties, which are dissolved or dispersed in a biocompatible, water-soluble organic solvent. (Id. at Abstract; see also id. at || 12—13, 21—22, 25—29, 49—50, claims 24, 40.) 10. Li teaches that “[pjharmaceutically acceptable organic solvents include, but are not limited to, N-methyl-2-pyrrolidone . . . .” (Id. at | 54.) Li also teaches embodiments having MPEG350 as the solvent. (Id. at || 16, 17, 69, 74.) 11. Li teaches that “[w]hen the liquid composition is injected into the body, the solvent dissipates into the surrounding aqueous environment, and the polymer precipitates to form a solid or gel depot from which the bioactive agent is released over a long period of time as the polymer degrades.” (Id. at 17; see also id. at || 49-50, claim 24.) 12. Li teaches that, “[f]or many therapeutic peptides, acylation and/or degradation of the peptides encapsulated in [certain polymer] microspheres have been observed during the release process.” (Id. at | 8.) Li further teaches that “[t]he nucleophilic functional groups on peptides can . . . react with the biodegradable polymer [and] also can catalyze the degradation of the biodegradable polymer.” (Id.) 13. Li additionally teaches that, during the formation of the implant, the rate of diffusion of the peptide from the coagulating polymeric composition may be much more rapid than the rate of release that occurs from the subsequently 8 Appeal 2016-001598 Application 12/366,321 formed solid implant. This initial “burst” release of peptide during implant formation may result in the loss or release of a large amount of the therapeutic peptides. If the peptide is particularly toxic or has a narrow therapeutic window, this initial release or burst is likely to lead to toxic side effects and may damage adjacent tissues. (Id. at 19.) 14. Li teaches that covalently modified peptides with one or more lipophilic and/or amphiphilic molecules could be formulated with biodegradable polymers resulting in significantly improved stability and sustained release profiles relative to non-conjugated peptides. Lipophilically and/or amphiphilically modified peptides could not only prevent the uncontrolled random acylation and degradation of the peptides during the formulation, storage and subsequent in vivo release processes, but could also reduce the undesired initial burst release of peptides. Such delivery systems allow higher concentrations of a therapeutic peptide to be safely incorporated into a biodegradable polymer delivery system. The efficacy of such products is also improved, since a much greater percentage of intact active peptide remains in the delivery system for sustained release and is not lost by degradation during the formulation, storage, administration and subsequent release in vivo. (Id. at 111; see also id. at || 12—13, 48, 80 (teaching that “covalently conjugated octreotide . . . prevented . . . acylation reaction [on the octreotide] and significantly reduced the degradation rate of the polymer relative to the unmodified octreotide”), claim 24.) 15. Li teaches that, [pjreferably, a therapeutic peptide is covalently conjugated to one or more amphiphilic molecules comprising (a) a hydrophilic moiety and (b) a lipophilic moiety, wherein the balanced hydrophilic and lipophilic characteristics of the amphiphilic molecule impart the conjugate with suitable solubility in biological fluid or aqueous solution. 9 Appeal 2016-001598 Application 12/366,321 More preferably, a therapeutic peptide is covalently conjugated to one or more amphiphilic molecules comprising (a) a linear polyethylene glycol moiety and (b) a lipophilic moiety, wherein the therapeutic peptide, the polyethylene glycol and the lipophilic moiety are conformationally arranged to have the lipophilic moiety exteriorly available for interaction with lipophilic environment or cell membranes. (Id. at 1139-40.) 16. Li teaches that “[pjeptides useful in the preparation of the formulation of the invention include, but are not limited to . . . glucagon-like peptide (GLP-1). . . .” (Id. at 125.) Li teaches embodiments where the therapeutic peptide is octreotide. (Id. at H 18—19, 33—34, 65—67, 77.) Li further teaches an embodiment where an amphiphilic molecule is covalently conjugated to octreotide. (Id. at H 42, 84 (teaching that “covalent conjugation of the peptide with an amphiphilic moiety such as monopalmityl poly(ethylene glycol) can prevent or significantly reduce the interaction and/or reaction between peptides and biodegradable polymers”).) Analysis We agree with the Examiner that claim 1 is rendered obvious by the combination of Tipton and Li. Tipton teaches a composition for controlled release of biologically active substances such as proteins and peptides (FF1, FF6), comprising (a) a non-polymeric, non-water soluble (i.e., hydrophobic) liquid carrier material such as SAIB (FF1, FF2), (b) a water soluble or miscible solvent such as NMP (FF3), and (c) the substance to be delivered (FF1). Fi teaches a composition for controlled release delivery of therapeutic peptides such as octreotide, where the peptides are covalently modified with one or more amphiphilic molecules. (FF8, FF9, FF13—16.) 10 Appeal 2016-001598 Application 12/366,321 Li further teaches that the therapeutic peptides are dissolved or dispersed in a biocompatible, water-soluble organic solvent and further teaches NMP and MPEG350 as examples of such solvent. (FF8, FF9.) Tipton suggests that using non-polymeric, non-water soluble high- viscosity liquid carrier material provides “more simple systems with low toxicity for the controlled delivery of substances.” (FF7.) Fi teaches that covalently modifying the therapeutic peptide with one or more amphiphilic molecules reduce acylation and/or degradation of the peptides, the degradation of the polymer in the formulation, and the undesired initial burst release of the peptides. (FF12—FF15.) Accordingly, we find that it would have been obvious to a skilled artisan to combine the disclosures of Tipton and Fi to arrive at the claimed invention: Given the teachings in Tipton and Fi regarding the advantages of a non-polymeric carrier and a peptide covalently modified with amphiphilic molecule(s), it would have been obvious to a skilled artisan to use Tipton’s non-polymeric, non-water soluble high viscosity liquid carrier material in place of Fi’s biocompatible, water- insoluble, biodegradable polymer and/or to use Fi’s octreotide covalently modified with one or more amphiphilic molecules and MPEG350 as the bioactive substance and solvent, respectively, in Tipton’s formulation. Finally, we agree with the Examiner that, given the substantial identity of the claimed composition and the composition rendered obvious by Tipton and Fi, the functional limitation in the wherein clause of claim 1 (i.e., covalently conjugated peptide maintaining the stability of the composition by preventing phase separation) is inherently met absent 11 Appeal 2016-001598 Application 12/366,321 evidence to the contrary. The predecessor to our reviewing court has counseled that, [w]here ... the claimed and prior art products are identical or substantially identical ... the PTO can require an applicant to prove that the prior art products do not necessarily or inherently possess the characteristics of his claimed product. . . . [The] fairness [of the burden-shifting] is evidenced by the PTO’s inability to manufacture products or to obtain and compare prior art products. In re Best, 562 F.2d 1252, 1255 (CCPA 1977). Appellants first contend that there is no reason to combine Tipton and Li. We disagree for the reasons discussed above. More particularly, Appellants argue that, whereas Tipton teaches “mov[ing] away from delivery systems that require the preparation of polymers and loaded polymeric matrices” and using a non-polymeric high viscosity liquid as the carrier, “Li teaches the use of biodegradable polymeric carriers, whereby the polymer coagulates or solidifies to produce the biodegradable solid implant.” (Br. 4.) We are not persuaded. A prior art reference is relevant for all that it teaches to those of ordinary skill in the art. In re Fritch, 972 F.2d 1260, 1264 (Fed. Cir. 1992). The fact that the formulations of Tipton and Li use different types of carriers does not render non-obvious the combination of the relevant disclosures of each reference to arrive at the claimed invention. Neither do the references teach away from the claimed combination, because neither Tipton nor Li discredits or otherwise discourages the combination of non-polymeric carrier and bioactive substance conjugated with amphiphilic molecules. In re Gurley, 27 F.3d 551, 553 (Fed. Cir. 1994) (“A reference may be said to teach away when a person of ordinary skill, upon reading the reference, would be discouraged 12 Appeal 2016-001598 Application 12/366,321 from following the path set out in the reference, or would be led in a direction divergent from the path that was taken by the applicant.”). Appellants also contend that, [e]ven if both the Tipton and Li references could be combined, there would not have been a reasonable expectation that combining these elements would yield a composition having the desired property of preventing phase separation and maintaining the stability of the formulation. (Id. at 5.) Appellants argue that Tipton does not suggest that there are phase separation problems with its formulation and Li also does not suggest maintaining the stability of its composition by preventing phase separation. (Id. at 4—5.) These arguments are also not persuasive. As an initial matter, “the statement that a prima facie obviousness rejection is not supported if no reference shows or suggests the newly-discovered properties and results of a claimed structure is not the law.” In re Dillon, 919 F.2d 688, 692—93 (Fed. Cir. 1990, en banc). Furthermore, Li suggests that covalently conjugating therapeutic peptides with amphiphilic molecules stabilizes the formulation, including by, e.g., imparting the conjugate with suitable solubility. (FF14, FF15.) Finally, we note but are not persuaded by Appellants’ argument that the claimed subject matter exhibits the unexpected results of increased stability and prevention of phase separation. (Id. at 5—6.) Appellants have not shown that increased stability and prevention of phase separation are unexpected in the claimed formulation, particularly given Li’s teaching that conjugating peptides with amphiphilic molecules imparts suitable solubility to the conjugate. (FF15.) 13 Appeal 2016-001598 Application 12/366,321 Accordingly, we affirm the Examiner’s rejection of claim 1. Claims 2—10, 16—21, and 23—27, which were not separately argued, fall with claim 1. 37C.F.R. §41.37(c)(l)(iv). II. Issue The Examiner rejects claims 23 and 24 under 35U.S.C. § 112, second paragraph, as being indefinite. Appellants do not argue this rejection, stating only that, “upon the allowability of claim 1 . . . , amendments will be made to claims 10 [and] 23—27 to overcome the rejection under 35U.S.C. [§] 112, second paragraph.” (Br. 7—8.) Accordingly, we summarily affirm the rejection. See Manual of Patent Examining Procedure § 1205.02 (“If a ground of rejection stated by the examiner is not addressed in the appellant's brief, . . . the Board may summarily sustain it.”) SUMMARY For the reasons above, we affirm the Examiner’s decision rejecting claims 1—10, 16—21, and 23—27. TIME PERIOD FOR RESPONSE No time period for taking any subsequent action in connection with this appeal may be extended under 37 C.F.R. § 1.136(a). AFFIRMED 14 Copy with citationCopy as parenthetical citation