Ex Parte Bergmann et alDownload PDFPatent Trials and Appeals BoardNov 30, 201812613891 - (D) (P.T.A.B. Nov. 30, 2018) Copy Citation UNITED STA TES p A TENT AND TRADEMARK OFFICE APPLICATION NO. FILING DATE FIRST NAMED INVENTOR 12/613,891 11/06/2009 23599 7590 12/04/2018 MILLEN, WHITE, ZELANO & BRANIGAN, P.C. 2200 CLARENDON BL VD. SUITE 1400 ARLINGTON, VA 22201 Andreas Bergmann UNITED STATES DEPARTMENT OF COMMERCE United States Patent and Trademark Office Address: COMMISSIONER FOR PATENTS P.O. Box 1450 Alexandria, Virginia 22313-1450 www .uspto.gov ATTORNEY DOCKET NO. CONFIRMATION NO. VOSS-0064 7298 EXAMINER FOSTER, CHRISTINE E ART UNIT PAPER NUMBER 1641 NOTIFICATION DATE DELIVERY MODE 12/04/2018 ELECTRONIC Please find below and/or attached an Office communication concerning this application or proceeding. The time period for reply, if any, is set in the attached communication. Notice of the Office communication was sent electronically on above-indicated "Notification Date" to the following e-mail address(es): docketing@mwzb.com PTOL-90A (Rev. 04/07) UNITED STATES PATENT AND TRADEMARK OFFICE BEFORE THE PATENT TRIAL AND APPEAL BOARD Ex parte ANDREAS BERGMANN and OLIVER HARTMANN 1 Appeal2017-010601 Application 12/613,891 Technology Center 1600 Before DONALD E. ADAMS, ELIZABETH A. LA VIER, and RYAN H. FLAX, Administrative Patent Judges. FLAX, Administrative Patent Judge. DECISION ON APPEAL This is a decision on appeal under 35 U.S.C. § 134(a) involving claims directed to a method for prognosticating an adverse outcome in a patient suffering from heart failure or shortness of breath. Claims 20-24, 26-30, 32-36, 38--43, 46, and 49-59 are on appeal as rejected under 35 U.S.C. § 101 and§ 103(a). We have jurisdiction under 35 U.S.C. § 6(b). We affirm. 1 Appellant identifies the Real Party in Interest as "B.R.A.H.M.S. GmbH." Reply Br. 1. Appeal2017-010601 Application 12/613,891 STATEMENT OF THE CASE Claim 20 is representative and is reproduced below: 20. A method for prognosticating an adverse outcome in a patient suffering from heart failure or shortness of breath, who has not suffered from or is not suffering from myocardial infarction, comprising: (a) detecting and quantitating in a blood, serum or plasma sample obtained from said patient, a level of a first marker which is mid-regional pro-adrenomedullin (MR-proADM) and a level of a second marker which is troponin, wherein the detecting and quantitating of said markers comprise immunoassays in which the sample is contacted with antibodies that specifically bind to the respective markers to form detectible complexes, which are quantified to determine the level of the markers, and (b) correlating the level of said markers with said adverse outcome at a defined time which is within 50 days of obtaining the sample, wherein a concentration of MR-proADM between 0.5 to 5.0 nmol/1 in said sample.,_ considered together with the troponin level, is indicative of said adverse outcome, which indicates a need for prioritized medical care. Appeal Br. 21 (Claims Appendix). Claim 24, the other independent claim, is similar, but differs in requiring the "defined time" to be "within 90 days" rather than 50 days. Id. at 21-22. The following rejections are appealed: Claims 20-24, 26-30, 32-36, 38--43, 46, and 49-59 stand rejected under 35 U.S.C. § 101 as directed to a judicial exception without significantly more. Final Action 4. 2 Appeal2017-010601 Application 12/613,891 Claims 20-24, 26-30, 32-36, 41--43, 46, and 49-59 stand rejected under 35 U.S.C. § 103(a) over the combined teachings of Gegenhuber, 2 Bergmann, 3 Christ, 4 and Sakhuja. 5 Id. at 7. Claims 20-24, 26-30, 32-36, 38--43, 46, and 49-59 stand rejected under 35 U.S.C. § 103(a) over the combined teachings of Gegenhuber, Bergmann, Christ, Sakhuja, and Peacock. 6 Id. at 12. DISCUSSION "[T]he examiner bears the initial burden, on review of the prior art or on any other ground, of presenting a prim a facie case of unpatentability. If that burden is met, the burden of coming forward with evidence or argument shifts to the applicant." In re Oetiker, 977 F.2d 1443, 1445 (Fed. Cir. 1992) ( emphasis added). Arguments made by Appellants in the Appeal Brief and properly presented in the Reply Brief have been considered; arguments not so-presented in the Briefs are waived. See 37 C.F.R. § 4I.37(c)(l)(iv) (2015); see also Ex parte Borden, 93 USPQ2d 1473, 1474 (BPAI 2010) 2 Alfons Gegenhuber MD et al., Comparative Evaluation of B-Type Natriuretic Peptide, Mid-Regional Pro-A-type Natriuretic Peptide, Mid- Regional Pro-Adrenomedullin, and Copeptin to Predict I-Year Mortality in Patients With Acute Destabilized Heart Failure, 13 J. CARDIAC FAILURE 42- 49 (2007) ("Gegenhuber"). 3 US 2007/0212742 Al (published Sept. 13, 2007) ("Bergmann"). 4 Michael Christ et al., Multimarker Strategy for Risk Prediction in Patients Presenting with Acute Dyspnea to the Emergency Department, 126 INT'L J. CARDIOLOGY 73-78 (2008) ("Christ"). 5 Rahul Sakhuja et al., Amino-Terminal Pro-Brain Natriuretic Peptide, Brain Natriuretic Peptide, and Troponin T for Prediction of Mortality in Acute Heart Failure, 53(3) CLINICAL CHEMISTRY 412-20 (2007) ("Sakhuja"). 6 W. Frank Peacock IV M.D. et al., Cardiac Troponin and Outcome in Acute Heart Failure, 358(20) N. ENGL. J. MED. 2117-26 (2008) ("Peacock"). 3 Appeal2017-010601 Application 12/613,891 (informative) ("Any bases for asserting error, whether factual or legal, that are not raised in the principal brief are waived."). I. PATENT ELIGIBILITY "Phenomena of nature, though just discovered, mental processes, and abstract intellectual concepts are not patentable, as they are the basic tools of scientific and technological work." Mayo Collaborative Servs. v. Prometheus Labs, Inc., 566 U.S. 66, 71 (2012) (quoting Gottschalkv. Benson, 409 U.S. 63, 67 (1972)). Claims directed to nothing more than abstract ideas (such as mathematical algorithms), natural phenomena, and laws of nature are not eligible for patent protection. Diamond v. Diehr, 450 U.S. 175, 185 (1981); accord MPEP § 2106 (II) (discussing Diehr); see also Parker v. Flook, 437 U.S. 584, 592-94 (1978) (if, once the mathematical algorithm is removed from consideration, nothing patentable remains, the claims are not patent-eligible). In analyzing patent-eligibility questions under 35 U.S.C. § 101, the Supreme Court instructs us to "first determine whether the claims at issue are directed to a patent-ineligible concept." Alice Corp. Pty. Ltd. v. CLS Bankint'l, 134 S. Ct. 2347, 2355 (2014). If the claims are so directed, we then move to a second step and "consider the elements of each claim both individually and 'as an ordered combination' to determine whether the additional elements 'transform the nature of the claim' into a patent-eligible application." Id. (quoting Mayo, 566 U.S. at 78-79). Here, under Alice's step one, the Examiner determined, "the claims are directed to a naturally occurring correlation between heart failure or shortness of breath outcome or risk and levels of biomarkers." Final Action 4 Appeal2017-010601 Application 12/613,891 4. Further, the Examiner found "the correlation of biomarker levels, considered individually or in a combination, to risk or presence of disease or survival occurs naturally in the human body without any outside human action." Id. at 5. Under Alice's step two, the Examiner determined that: The combination of steps recited in these process claims taken as a whole, including the well-understood, routine, and con- ventional steps of data acquisition recited with a high level of generality which would substantially foreclose others from using the naturally occurring correlation, or limitations of the use to a particular technological environment (field-of-use) ("Guidance", LB. I), such as to a generic immunoassay, are not sufficient to qualify as a patent-eligible practical application of a law of nature or of a naturally occurring correlation, i.e. of a natural principle, as the claims do not amount to significantly more than a statement of the natural principle, i.e. the correlation, with generalized directions to apply it to the relevant population. Id. at 4--5. As evidence that the additionally claimed subject matter (beyond the elements directed to the natural phenomenon) do not go beyond routine and conventional activity the Examiner cited Bergmann, Ng, 7 and Khan. 8 Id. at 14--15; Answer 16. It is without question that "[t]he line between a patentable 'process' and an unpatentable 'principle' is not always clear." Flook, 437 U.S. at 589; see also Synopsys, Inc. v. Mentor Graphics Corp., 839 F.3d 1138, 1150 (Fed. Cir. 2016) ("defining the precise abstract idea of patent claims in many 7 US 2008/0213746 Al (published Sept. 4, 2008) ("Ng"). 8 De Sohail Q. Khan et al., Prognostic Value of Midregional Pro- Adrenomedullin in Patients With Acute Myocardial Infarction, 49(14) J. AM. COL. CARDIOLOGY 1524--32 (2007) ("Khan"). 5 Appeal2017-010601 Application 12/613,891 cases is far from a 'straightforward' exercise") (quoting DDR Holdings, LLC v. Hotels.com, L.P., 773 F.3d 1245, 1257 (Fed. Cir. 2014)). Here, a reasonable case could be made that the Examiner's determination under Alice 's step one is without error on the basis that the claims are directed to a natural correlation between the body's expression of certain proteins and the mortality risk associated with a cardiac failure. See, e.g., Mayo, 566 U.S. 66; Genetic Technologies, Ltd. v. Merial L.L.C., 818 F.3d 1369 (Fed. Cir. 2016); Ariosa Diagnostics, Inc. v. Seqenom, Inc., 788 F.3d 1371 (Fed. Cir. 2015); and In re BRCAJ- & BRCA2-Based Hereditary Cancer Test Patent Litigation, 774 F.3d 755 (Fed. Cir. 2014). As noted by the Supreme Court, however, "all inventions at some level embody, use, reflect, rest upon, or apply laws of nature, natural phenomena, or abstract ideas" and "a process is not unpatentable simply because it contains a law of nature or a mathematical algorithm." Mayo, 566 U.S. at 71 (quoting Diehr, 450 U.S. at 187). Regarding the Alice step one determination, Appellants argue that "the definition for the naturally occurring phenomenon is too broad." Appeal Br. 5. Appellants also argue that "[t]he claimed invention only makes use of the naturally occurring phenomenon of the correlation between heart failure or shortness of breath outcome or risk and MR-proADM level when such phenomenon is also used together with the correlation between heart failure of shortness of breath outcome or risk and troponin level." Id. These arguments are not persuasive. The Examiner's identified natural phenomenon appears on target and pairing two natural phenomena or natural occurring things, here (1) MR-proADM as a natural marker for 6 Appeal2017-010601 Application 12/613,891 cardiac distress and (2) troponin as another natural marker for cardiac distress, does not mean the new package is transformed into a patent-eligible invention. See Funk Bros. Seed Co. v. Kala Inoculant Co., 333 U.S. 127, 129-32 (1948) ("The aggregation of select strains of the several [bacterial] species" does not change the fact that their "qualities are the work of nature" and "[t]hose qualities are of course not patentable."). Regarding the Alice step two determination, Appellants argue: Appellants further urge that the USPTO, in considering whether the elements of the invention, other than the alleged natural principles, define "significantly more" than the natural principles, is failing to consider whether the elements of the invention taken in combination are "well-understood, routine, conventional" activities in the relevant art. Appellants submit that the Final Office action is merely considering whether such elements are individually known or conventional (as evidenced by the citation of multiple references to evidence there knowledge) rather than whether their combination was known or conventional. Appeal Br. 6-7. Appellants contend: Even if it was conventional to assess MR-proADM level and troponin levels separately, it certainly was not conventional to conduct a method which includes detecting and quantifying both the MR-proADM level and troponin level in combination or provide a prognosis on adverse outcome or risk stratification therefrom. There is no evidence on the record to suggest that assessing and considering both of these levels together was conventional - or even remotely known. Id. at 7. Appellants argue that "[s]omething that is 'conventional' is not merely just known but well known and commonly in use," and that the combination of claimed steps (i.e., detecting and quantifying both MR- proADM and troponin) was not conventional under such a definition. Id. at 7 Appeal2017-010601 Application 12/613,891 7-8. Appellants contend the relevant disclosure of Ng is generic and is not directed to measuring MR-proADM and troponin in combination; no teaching such was conventional. Reply Br. 1-2. Even if the claims on appeal are "directed to" a natural phenomenon under the first step of the Alice framework as determined by the Examiner, we conclude that the Examiner has not established that the additional elements recited in the claims, considered individually and as an ordered combination, were well-understood, routine, and conventional. Regarding a determination that, e.g., non-natural-phenomenon, claim elements are merely routine and conventional, the Federal Circuit has explained that, Whether something is well-understood, routine, and con- ventional to a skilled artisan at the time of the patent is a factual determination. Whether a particular technology is well- understood, routine, and conventional goes beyond what was simply known in the prior art. The mere fact that something is disclosed in a piece of prior art, for example, does not mean it was well-understood, routine, and conventional. Berkheimer v. HP Inc., 881 F.3d 1360, 1369 (Fed. Cir. 2018). Here, after we strip away the natural phenomenon ( expression of elevated levels of MR-proADM and troponin in patients suffering from heart failure and that they correlate to subsequent adverse outcomes), we are left with the claims' required coordinated steps of detecting MR-proADM and troponin using immunoassays (respective antibodies), making a correlation of adverse outcome within 50 days ( or 90 days in the case of claim 24) of sampling, where a concentration of 0.5-5.0 nmol/L MR-pro-ADM and some unidentified troponin level indicates a need for prioritized medical care. The Examiner concluded that the references Bergmann, Ng, and Khan evidenced 8 Appeal2017-010601 Application 12/613,891 that such additional steps beyond the natural correlation of such proteins to predictable adverse cardiac events was no more than routine ( and conventional). Final Action 4---6, 14--15; Answer 12-19. Although we agree with the Examiner that these cited prior art references may disclose, individually or even in some combination, detecting and measuring MR-proADM and/or troponin, using immunoassays, and correlating such measurements with the likelihood of adverse cardiac events, we conclude that these references do not indicate that the claimed individual steps, much less the ordered combination thereof, were necessarily routine and/or conventional in the art. To the contrary, the cited references describe the relevant techniques individually as inventive or experimental. For example, Bergmann discloses that its invention is determining MR-proADM levels, along with other markers, using antibodies, to diagnose cardiac and other conditions; not that detecting MR-proADM using immunoassay was necessarily routine or conventional. Bergmann Abstract, ,r,r 1-15 (background), ,r,r 48--49. Further, Ng discloses that its invention is diagnosing cardiac failure risk by measuring MR-proADM and troponin, and even that, prior its invention, measuring proADM to diagnose sepsis and also multi-marker strategies detecting ADM (and BNP) were known to be predictive of heart failure; but this is not necessarily evidence that the claimed steps, individually or as an ordered combination were routine or conventional. Ng Abstract, ,r,r 3-8 (background), 32-34. Moreover, Khan discloses a study that confirmed the prognostic value of measuring MR- proADM for heart failure/death and also that troponin levels were elevated 9 Appeal2017-010601 Application 12/613,891 in the relevant patient population; however, this does not mean that such measurements and identified correlations were routinely or customarily made or used. Khan 1525-27. While these prior art teachings may be relevant in analyzing anticipation or obviousness where routineness and conventionality are irrelevant, they do not establish the routineness or conventionality of the claimed subject matter when analyzing patent eligibility. See Diehr, 450 U.S. at 189-90 (novelty and patent eligibility are wholly separate considerations); Classen Immunotherapies, Inc. v. Biogen IDEC, 659 F.3d 1057, 1064---65 (Fed. Cir. 2011) (quoting Diehr: "rejection on either of [ § 102 or 103] does not affect the determination that respondents' claims recited subject matter which was eligible for patent protection under § 101 "); see also MySpace, Inc. v. Graph On Corp., 672 F.3d 1250, 1261 (Fed. Cir. 2012) ("Following the Supreme Court's lead, [we] should avoid reaching for interpretations of broad provisions, such as § 101, when more specific statutes, such as § § 102, 103, and 112, can decide the case."). Thus, while the claim is directed to a natural phenomenon and the prior art might teach or suggest the individual steps recited by the appealed claims, or components thereof, the evidence on appeal does not support the conclusion that the claimed steps, as an ordered combination, constitute mere routine and customary techniques that do not provide the "something more" than the natural phenomenon upon which they rely so as to provide an inventive concept. For these reasons, we find the rejection insufficiently supported on the record before us. We reverse the rejection. 10 Appeal2017-010601 Application 12/613,891 IL OBVIOUSNESS "The combination of familiar elements according to known methods is likely to be obvious when it does no more than yield predictable results." KSR Int'! Co. v. Teleflex Inc., 550 U.S. 398,416 (2007). "[W]hen a patent claims a structure [ or method] already known in the prior art that is altered by the mere substitution of one element [ or step] for another known in the field, the combination must do more than yield a predictable result." Id. (citing United States v. Adams, 383 U.S. 39, 50-51 (1966)). "In determining whether the subject matter of a patent claim is obvious, neither the particular motivation nor the avowed purpose of the patentee controls. What matters is the objective reach of the claim. If the claim extends to what is obvious, it is invalid under § 103." Id. at 419. [M]otivation to combine is ... inextricably linked to the level of ordinary skill. . . . If the level of skill is low, ... then it may be rational to assume that such an artisan would not think to combine references absent explicit direction in a prior art reference. If, however, ... the level of skill is ... [high, as it is here], then one can assume comfortably that such an artisan will draw ideas from chemistry and systems engineering-without being told to do so. DyStar Textilfarben GmbH & Co. v. C.H. Patrick Co., 464 F.3d 1356, 1370 (Fed. Cir. 2006). "[T]he question is whether there is something in the prior art as a whole to suggest the desirability, and thus the obviousness, of making the combination, not whether there is something in the prior art as a whole to suggest that the combination is the most desirable combination available." In re Fulton, 391 F.3d 1195, 1200 (Fed. Cir. 2004) (citation omitted). 11 Appeal2017-010601 Application 12/613,891 It is obvious to those skilled in the art to substitute one known equivalent for another. See In re Omeprazole Patent Litigation, 483 F.3d 1364, 1374 (Fed. Cir. 2007) ("[T]his court finds no ... error in [the] conclusion that it would have been obvious to one skilled in the art to substitute one ARC [alkaline reactive compound] for another."). "[I]f a technique has been used to improve one device, and a person of ordinary skill in the art would recognize that it would improve similar devices in the same way, using the technique is obvious unless its actual application is beyond his or her skill." KSR, 550 U.S. at 417. "[F]amiliar items may have obvious uses beyond their primary purposes, and in many cases a person of ordinary skill will be able to fit the teachings of multiple patents together like pieces of a puzzle." Id. at 420. One way for a patent applicant to rebut a prima facie case of obviousness is to make a showing of "unexpected results," i.e., to show that the claimed invention exhibits some superior property or advantage that a person of ordinary skill in the relevant art would have found surprising or unexpected. In re Soni, 54 F.3d 746, 750 (Fed. Cir. 1995). However, "[m]ere recognition of latent properties in the prior art does not render nonobvious an otherwise known invention." In re Baxter Travenol Labs., 952 F.2d 388, 392 (Fed. Cir. 1991). "To be particularly probative, evidence of unexpected results must establish that there is a difference between the results obtained and those of the closest prior art, and that the difference would not have been expected by one of ordinary skill in the art at the time of the invention." Bristol-Myers Squibb Co. v. Teva Pharms. USA, Inc., 752 F.3d 967, 977 (Fed. Cir. 2014). "The evidence presented to rebut aprimafacie case of 12 Appeal2017-010601 Application 12/613,891 obviousness must be commensurate in scope with the claims to which it pertains." In re Dill, 604 F.2d 1356, 1361 (CCPA 1979). Findings of Fact We adopt the Examiner's findings of fact and rationale on obviousness as set forth in the Final Action and Answer. The following findings of fact highlight certain evidence. FF 1. Gegenhuber disclosed that each of B-type natriuretic peptide (BNP), mid-regional pro-A-type natriuretic peptide (MR- proANP), mid-regional pro-adrenomedullin (MR-proADM), and the C-terminal part of the arginine vasopressin prohormone (Copeptin), can each be measured in cardiac patients and that increases in each and any of these markers is strongly predictive of mortality. Gegenhuber 42 (abstract). FF2. Gegenhuber disclosed that MR-proADM can be detected and measured via ( commercially available) immunoassay to predict heart failure. Gegenhuber 43. FF3. Gegenhuber disclosed that MR-proADM measurements between 0.65-1.21 nmol/L were predictive of survival in cardiac patients and MR-proADM measurements of 0.95-2.43 nmol/L were predictive of death in cardiac patients (with a p-value of< 0.001 ). Gegenhuber 44 (Table 1 ). 13 Appeal2017-010601 Application 12/613,891 FF4. Gegenhuber disclosed data in the following graph: ;..,....,,....~ --~-----.... -.,.._-., ..... ...,. • . . . Cw-.--.~·l-.. ft'ig. 4. Kaplan-Meier plots showing sitrvival in 137 patients \.Vith acute destabilized hean failure \vho were stratified into 3 groups ac,:ording to plasma mid-regional prt)-adrennmedul.lfa terciles at base.Hoe (ht terdk <0.75 nmolfL. n = 4 1 .23 mnol/L, n = 46, dotted line; log-rank test for trend, P < .001), The graph reproduced above shows patient mortality as correlated with elevated levels ofMR-proADM over the course of one year and shows a particularly precarious drop in mortality over the first 50 ( or fewer) days for patients having greater than 1.23 nmol/L measured MR-proADM. Gegenhuber 46 (Fig. 4). FF5. Gegenhuber states, "most single-variable markers are characterized by unsatisfactory discrimination of patients with and without increased heart failure mortality," and suggests that more than 14 Appeal2017-010601 Application 12/613,891 a single predictive marker should be considered simultaneously, as a multivariable analysis, for best results. Gegenhuber 45--48 (Table 5). FF6. Bergmann disclosed measuring mid-proAM (MR- proADM) by immunoassay to diagnose cardiac issues, among other conditions. Bergmann Abstract. FF7. Bergmann disclosed that measured concentrations of MR-proADM between 0.5-3.0 (or slightly higher) nmol/L were indicative of cardiac disease and that MR-proADM "gives highly significant measured results" as to cardiac diagnosis. Bergmann Fig. 2, ,r 48. FF8. Bergmann teaches and suggests that, in addition to measuring MR-proADM, a cardiac diagnosis should also simultaneously measure ANP, BNP, proANP, and/or proBNP (and also CRP). Bergmann ,r 49. FF9. Christ disclosed a multimarker approach that improved the prediction of risk of death in patients that assessed BNP, cardiac troponin, and CRP, indicating that a predictive threshold for the troponin component was> 0.8 µg/L, and further stating that "risk of death or rehospitalization significantly increased with the number of elevated biomarkers," concluding that a "multimarker approach with simultaneous assessment of BNP, and cTNI [troponin] demonstrate[d] potential to assist clinicians in predicting risk." Christ 73 (abstract). 15 Appeal2017-010601 Application 12/613,891 FFlO. Christ disclosed data in the following graphs: A) Mortality at 30 days B) Mortality at 24 months 0.6 P<0.001 0.5· ~ 0.4 -! 0.3· 0 :! 0.2 0.1 · ~ l 0 ' 0 1 2 3 No. of elevated biomarker$ flg J •. \forhtl!!y a~b aJt;;.~r JO days {A) and 24 rn.onths {B) nf follnw-np in Yl5 pi:11it\:cK~ pn~.srming ,1.,'J;_h ~,:)Jk dytp;.K:a to foi.; r..un~rgCopy with citationCopy as parenthetical citation